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A new strategy to infer circularity applied to four new complete frog mitogenomes
Title
A new strategy to infer circularity applied to four new complete frog mitogenomes
Author
Machado, Denis Jacob, Janies, Daniel, Brouwer, Cory, Grant, Taran
Date Created
2018
Subjects--Topical
Genomics, Amphibians, Bioinformatics
Description
We applied a novel strategy to infer sequence circularity and complete assembly of four mitochondrial genomes (mitogenomes) of the frog families Bufonidae (Melanophryniscus moreirae), Dendrobatidae (Hyloxalus subpunctatus and Phyllobates terribili...
A subterminal growth zone at arm tip likely underlies life-long indeterminate growth in brittle stars
Title
A subterminal growth zone at arm tip likely underlies life-long indeterminate growth in brittle stars
Author
Janies, Daniel, Machado, Denis Jacob, Reid, Robert, Kofsky, Janice
Date Created
2022
Subjects--Topical
Genomics, Biology
Description
Background Echinoderms are a phylum of marine invertebrates with close phylogenetic relationships to chordates. Many members of the phylum Echinodermata are capable of extensive post-traumatic regeneration and life-long indeterminate growth. Diffe...
Active Notch signaling is required for arm regeneration in a brittle star
Title
Active Notch signaling is required for arm regeneration in a brittle star
Author
Janies, Daniel, Machado, Denis Jacob, Reid, Robert
Date Created
2020
Subjects--Topical
Genomics, Biology
Description
Cell signaling pathways play key roles in coordinating cellular events in development. The Notch signaling pathway is highly conserved across all multicellular animals and is known to coordinate a multitude of diverse cellular events, including pr...
The first complete mitochondrial genome of the sand dollar Sinaechinocyamus mai (Echinoidea: Clypeasteroida)
Title
The first complete mitochondrial genome of the sand dollar Sinaechinocyamus mai (Echinoidea: Clypeasteroida)
Author
Janies, Daniel, Machado, Denis Jacob
Date Created
2020
Subjects--Topical
Genomics, Biology
Description
Morphologic and molecular data often lead to different hypotheses of phylogenetic relationships. Such incongruence has been found in the echinoderm class Echinoidea. In particular, the phylogenetic status of the order Clypeasteroida is not well re...
Twinkle twinkle brittle star : the draft genome of Ophioderma brevispinum (Echinodermata: Ophiuroidea) as a resource for regeneration research
Title
Twinkle twinkle brittle star : the draft genome of Ophioderma brevispinum (Echinodermata: Ophiuroidea) as a resource for regeneration research
Author
Janies, Daniel, Machado, Denis Jacob, Reid, Robert, Kofsky, Janice
Date Created
2022
Subjects--Topical
Genomics, Biology
Description
Background Echinoderms are established models in experimental and developmental biology, however genomic resources are still lacking for many species. Here, we present the draft genome of Ophioderma brevispinum, an emerging model organism in the f...