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The complete mitochondrial genome of the sea urchin, Echinometra sp. EZ
Title
The complete mitochondrial genome of the sea urchin, Echinometra sp. EZ
Author
Ketchum, Remi, DeBiasse, Melissa B., Ryan, Joseph F., Burt, John A., Reitzel, Adam M.
Subjects--Topical
Mitochondrial DNA, Sea urchins
Description
The complete mitogenome of Echinometra sp. EZ has been described and fully annotated in this study. Phylogenetic analysis of cytochrome c oxidase subunit I (COI) from six Echinometra species confirms that our sample is E. sp. EZ. The mitogenome is...
Population genomic analyses of the sea urchin Echinometra sp. EZ across an extreme environmental gradient
Title
Population genomic analyses of the sea urchin Echinometra sp. EZ across an extreme environmental gradient
Author
Ketchum, Remi, Smith, Edward, DeBiasse, Melissa B., Vaughan, Grace, McParland, Dain, Leach, Whitney, Al-Mansoori, Noura, Ryan, Joseph F., Burt, John A., Reitzel, Adam M.
Subjects--Topical
Sea urchins, Extreme environments, Marine biology
Description
Extreme environmental gradients represent excellent study systems to better understand the variables that mediate patterns of genomic variation between populations. They also allow for more accurate predictions of how future environmental change m...
DNA extraction method plays a significant role when defining bacterial community composition in the marine invertebrate Echinometra mathaei
Title
DNA extraction method plays a significant role when defining bacterial community composition in the marine invertebrate Echinometra mathaei
Author
Reitzel, Adam M., Ketchum, Remi, Carrier, Tyler J.
Date Created
2018
Subjects--Topical
Bacteria, Biology
Description
The microbial assemblages of marine organisms play fundamental biological roles in their eukaryotic hosts. Studies aimed at characterizing this diversity have increased over the last decade and with the availability of high-throughput sequencing, ...
A chromosome-level genome assembly of the highly heterozygous sea urchin Echinometra sp. EZ reveals adaptation in the regulatory regions of stress response genes
Title
A chromosome-level genome assembly of the highly heterozygous sea urchin Echinometra sp. EZ reveals adaptation in the regulatory regions of stress response genes
Author
Reitzel, Adam M., Ketchum, Remi, Smith, Edward, Davidson, Phillip L.
Date Created
2022
Subjects--Topical
Sea urchins, Echinodermata
Description
Echinometra is the most widespread genus of sea urchin and has been the focus of a wide range of studies in ecology, speciation, and reproduction. However, available genetic data for this genus are generally limited to a few select loci. Here, we ...